Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs17160408 | chr1:147020638 | A/T | 7.63E-7 | 210 | 16.47 | 15.82 | 4.07 | KM Plot |
| KIRP | rs17172490 | chr7:45226579 | A/G | 0.000276 | 214 | 15.2 | 19.33 | 9.43 | KM Plot |
| KIRP | rs17172491 | chr7:45226642 | T/C | 0.000276 | 214 | 15.2 | 19.33 | 9.43 | KM Plot |
| KIRP | rs17183940 | chr14:23726626 | A/G | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |
| KIRP | rs17198514 | chr12:7298205 | A/C | 1.4E-5 | 207 | 14.97 | 20.15 | 4.87 | KM Plot |
| KIRP | rs17215225 | chr4:76557048 | G/A | 9.37E-6 | 210 | 14.32 | 17.12 | 14.73 | KM Plot |
| KIRP | rs17256134 | chr14:23726761 | G/A | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |
| KIRP | rs17256141 | chr14:23726814 | G/A | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |
| KIRP | rs17281874 | chr4:76586888 | T/C | 3.05E-5 | 212 | 14.53 | 17.03 | 14.73 | KM Plot |
| KIRP | rs17389184 | chr1:209916789 | C/T | 4.94E-5 | 214 | 13.88 | 19.9 | 8.03 | KM Plot |
| KIRP | rs17429004 | chr1:48823047 | A/G | 3.49E-7 | 213 | 14.85 | 19.87 | 11.03 | KM Plot |
| KIRP | rs17433780 | chr1:89474818 | C/T | 6.12E-5 | 214 | 10 | 13.6 | 19.5 | KM Plot |
| KIRP | rs17434151 | chr1:89500526 | G/T | 0.00012 | 209 | 16.43 | 16.47 | 11.2 | KM Plot |
| KIRP | rs17434342 | chr1:89505742 | C/G | 4.94E-5 | 214 | 11.32 | 15.88 | 18.2 | KM Plot |
| KIRP | rs17435469 | chr11:34980542 | T/G | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |